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Applied Maths bionumerics version 6.0 software
Bionumerics Version 6.0 Software, supplied by Applied Maths, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bionumerics+6%2E0+software/bionumerics+software/pm38402669-53-5-9
Average 90 stars, based on 1 article reviews
bionumerics version 6.0 software - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

Pulsed-Field Gel:

Article Title: Short communication: Diversity of species and transmission of antimicrobial resistance among Staphylococcus spp. isolated from goat milk.
Article Snippet: Clustering analysis of the pulsed-field gel electrophoresis products was performed using Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) with the unweighted pair-group method with arithmetic mean (UPGMA) algorithm and the Jaccard coefficient.

Article Title: Multilocus variable number tandem repeat analysis of Edwardsiella piscicida isolates pathogenic to fish.
Article Snippet: This study describes a novel multilocus variable number tandem repeat analysis (MLVA) based on six variable number of tandem repeat (VNTR) loci for genotyping of 37 Edwardsiella piscicida (previously Edwardsiella tarda) isolates from multiple sources.. The number of alleles identified for each of the six VNTR loci ranged from 3 to 5 with VNTR loci 1 (DI = 0.632) and 3 (DI = 0.644), displaying the highest degrees of polymorphism.. MLVA typing of the 37 E. piscicida isolates resulted in the identification of five major clusters consistent with their geographical origins, and were designated as MLVA types I, II, III, IV and V. Types III and V were resolved further into subtypes largely consistent with outbreak source.

Article Title: Prebiotic effect of fructooligosaccharide in the simulator of the human intestinal microbial ecosystem (SHIME® model).
Article Snippet: Maintaining ‘‘gut health’’ is a goal for scientists throughout the world.. Therefore, microbiota management models for testing probiotics, prebiotics, and synbiotics have been developed.. The SHIME model was used to study the effect of fructooligosaccharide (FOS) on the fermentation pattern of the colon microbiota.

Article Title: Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution
Article Snippet: Analysis was performed using the Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) to construct a Dice coefficient dendrogram based on the unweighted pair group method with arithmetics average (UPGMA) algorithm.

Article Title: Mutations in rpoB and fusA cause resistance to rifampicin and fusidic acid in methicillin-resistant Staphylococcus aureus strains from a tertiary hospital in Malaysia.
Article Snippet: Results: MIC for rifampicin and fusidic acid resistance ranged from ,1 to 8 mg/ml and from ,1 to 256 mg/ml, respectively.. A double mutation (484Arg/His and 517Glu/Gln) in rpoB causes high rifampicin resistance while a mutational change (461Leu/Lys) in fusA was observed in seven strains highly resistant to fusidic acid.. Five of the seven were also resistant to rifampicin (MIC 8 mg/ml) and carried a mutated rpoB gene (484Arg/His).

Article Title: The emergence of colistin-resistant Klebsiella pneumoniae strains from swine in Malaysia.
Article Snippet: Objective: Colistin is the last line of therapy for infections caused by multidrug-resistant Gram-negative bacteria.. The objective of this study was to determine the phenotypic and genotypic characteristics of colistin-resistant Klebsiella pneumoniae (K. pneumoniae) isolated from swine samples in Malaysia.. Methods: A total of 46 swine K. pneumoniae strains isolated from 2013–2015 in Malaysia were analysed for the production of extended-spectrum β-lactamases and carbapenemase.

Article Title: Impact of combining acerola by-product with a probiotic strain on a gut microbiome model.
Article Snippet: BioNumerics 6.0 software (Applied Maths, Kortrijk, Belgium) was used to analyse the distance matrices of each DGGE based on the Pearson similarity.

Software:

Article Title: Short communication: Diversity of species and transmission of antimicrobial resistance among Staphylococcus spp. isolated from goat milk.
Article Snippet: Clustering analysis of the pulsed-field gel electrophoresis products was performed using Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) with the unweighted pair-group method with arithmetic mean (UPGMA) algorithm and the Jaccard coefficient.

Article Title: Multilocus variable number tandem repeat analysis of Edwardsiella piscicida isolates pathogenic to fish.
Article Snippet: This study describes a novel multilocus variable number tandem repeat analysis (MLVA) based on six variable number of tandem repeat (VNTR) loci for genotyping of 37 Edwardsiella piscicida (previously Edwardsiella tarda) isolates from multiple sources.. The number of alleles identified for each of the six VNTR loci ranged from 3 to 5 with VNTR loci 1 (DI = 0.632) and 3 (DI = 0.644), displaying the highest degrees of polymorphism.. MLVA typing of the 37 E. piscicida isolates resulted in the identification of five major clusters consistent with their geographical origins, and were designated as MLVA types I, II, III, IV and V. Types III and V were resolved further into subtypes largely consistent with outbreak source.

Article Title: Prebiotic effect of fructooligosaccharide in the simulator of the human intestinal microbial ecosystem (SHIME® model).
Article Snippet: Maintaining ‘‘gut health’’ is a goal for scientists throughout the world.. Therefore, microbiota management models for testing probiotics, prebiotics, and synbiotics have been developed.. The SHIME model was used to study the effect of fructooligosaccharide (FOS) on the fermentation pattern of the colon microbiota.

Article Title: Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution
Article Snippet: Analysis was performed using the Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) to construct a Dice coefficient dendrogram based on the unweighted pair group method with arithmetics average (UPGMA) algorithm.

Article Title: Mutations in rpoB and fusA cause resistance to rifampicin and fusidic acid in methicillin-resistant Staphylococcus aureus strains from a tertiary hospital in Malaysia.
Article Snippet: Results: MIC for rifampicin and fusidic acid resistance ranged from ,1 to 8 mg/ml and from ,1 to 256 mg/ml, respectively.. A double mutation (484Arg/His and 517Glu/Gln) in rpoB causes high rifampicin resistance while a mutational change (461Leu/Lys) in fusA was observed in seven strains highly resistant to fusidic acid.. Five of the seven were also resistant to rifampicin (MIC 8 mg/ml) and carried a mutated rpoB gene (484Arg/His).

Article Title: The emergence of colistin-resistant Klebsiella pneumoniae strains from swine in Malaysia.
Article Snippet: Objective: Colistin is the last line of therapy for infections caused by multidrug-resistant Gram-negative bacteria.. The objective of this study was to determine the phenotypic and genotypic characteristics of colistin-resistant Klebsiella pneumoniae (K. pneumoniae) isolated from swine samples in Malaysia.. Methods: A total of 46 swine K. pneumoniae strains isolated from 2013–2015 in Malaysia were analysed for the production of extended-spectrum β-lactamases and carbapenemase.

Article Title: Impact of combining acerola by-product with a probiotic strain on a gut microbiome model.
Article Snippet: BioNumerics 6.0 software (Applied Maths, Kortrijk, Belgium) was used to analyse the distance matrices of each DGGE based on the Pearson similarity.

Denaturing Gradient Gel Electrophoresis:

Article Title: Short communication: Diversity of species and transmission of antimicrobial resistance among Staphylococcus spp. isolated from goat milk.
Article Snippet: Clustering analysis of the pulsed-field gel electrophoresis products was performed using Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) with the unweighted pair-group method with arithmetic mean (UPGMA) algorithm and the Jaccard coefficient.

Article Title: Multilocus variable number tandem repeat analysis of Edwardsiella piscicida isolates pathogenic to fish.
Article Snippet: This study describes a novel multilocus variable number tandem repeat analysis (MLVA) based on six variable number of tandem repeat (VNTR) loci for genotyping of 37 Edwardsiella piscicida (previously Edwardsiella tarda) isolates from multiple sources.. The number of alleles identified for each of the six VNTR loci ranged from 3 to 5 with VNTR loci 1 (DI = 0.632) and 3 (DI = 0.644), displaying the highest degrees of polymorphism.. MLVA typing of the 37 E. piscicida isolates resulted in the identification of five major clusters consistent with their geographical origins, and were designated as MLVA types I, II, III, IV and V. Types III and V were resolved further into subtypes largely consistent with outbreak source.

Article Title: Prebiotic effect of fructooligosaccharide in the simulator of the human intestinal microbial ecosystem (SHIME® model).
Article Snippet: Maintaining ‘‘gut health’’ is a goal for scientists throughout the world.. Therefore, microbiota management models for testing probiotics, prebiotics, and synbiotics have been developed.. The SHIME model was used to study the effect of fructooligosaccharide (FOS) on the fermentation pattern of the colon microbiota.

Article Title: Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution
Article Snippet: Analysis was performed using the Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) to construct a Dice coefficient dendrogram based on the unweighted pair group method with arithmetics average (UPGMA) algorithm.

Article Title: Mutations in rpoB and fusA cause resistance to rifampicin and fusidic acid in methicillin-resistant Staphylococcus aureus strains from a tertiary hospital in Malaysia.
Article Snippet: Results: MIC for rifampicin and fusidic acid resistance ranged from ,1 to 8 mg/ml and from ,1 to 256 mg/ml, respectively.. A double mutation (484Arg/His and 517Glu/Gln) in rpoB causes high rifampicin resistance while a mutational change (461Leu/Lys) in fusA was observed in seven strains highly resistant to fusidic acid.. Five of the seven were also resistant to rifampicin (MIC 8 mg/ml) and carried a mutated rpoB gene (484Arg/His).

Article Title: The emergence of colistin-resistant Klebsiella pneumoniae strains from swine in Malaysia.
Article Snippet: Objective: Colistin is the last line of therapy for infections caused by multidrug-resistant Gram-negative bacteria.. The objective of this study was to determine the phenotypic and genotypic characteristics of colistin-resistant Klebsiella pneumoniae (K. pneumoniae) isolated from swine samples in Malaysia.. Methods: A total of 46 swine K. pneumoniae strains isolated from 2013–2015 in Malaysia were analysed for the production of extended-spectrum β-lactamases and carbapenemase.

Article Title: Impact of combining acerola by-product with a probiotic strain on a gut microbiome model.
Article Snippet: BioNumerics 6.0 software (Applied Maths, Kortrijk, Belgium) was used to analyse the distance matrices of each DGGE based on the Pearson similarity.

Amplification:

Article Title: Short communication: Diversity of species and transmission of antimicrobial resistance among Staphylococcus spp. isolated from goat milk.
Article Snippet: Clustering analysis of the pulsed-field gel electrophoresis products was performed using Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) with the unweighted pair-group method with arithmetic mean (UPGMA) algorithm and the Jaccard coefficient.

Article Title: Multilocus variable number tandem repeat analysis of Edwardsiella piscicida isolates pathogenic to fish.
Article Snippet: This study describes a novel multilocus variable number tandem repeat analysis (MLVA) based on six variable number of tandem repeat (VNTR) loci for genotyping of 37 Edwardsiella piscicida (previously Edwardsiella tarda) isolates from multiple sources.. The number of alleles identified for each of the six VNTR loci ranged from 3 to 5 with VNTR loci 1 (DI = 0.632) and 3 (DI = 0.644), displaying the highest degrees of polymorphism.. MLVA typing of the 37 E. piscicida isolates resulted in the identification of five major clusters consistent with their geographical origins, and were designated as MLVA types I, II, III, IV and V. Types III and V were resolved further into subtypes largely consistent with outbreak source.

Article Title: Prebiotic effect of fructooligosaccharide in the simulator of the human intestinal microbial ecosystem (SHIME® model).
Article Snippet: Maintaining ‘‘gut health’’ is a goal for scientists throughout the world.. Therefore, microbiota management models for testing probiotics, prebiotics, and synbiotics have been developed.. The SHIME model was used to study the effect of fructooligosaccharide (FOS) on the fermentation pattern of the colon microbiota.

Article Title: Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution
Article Snippet: Analysis was performed using the Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) to construct a Dice coefficient dendrogram based on the unweighted pair group method with arithmetics average (UPGMA) algorithm.

Article Title: Mutations in rpoB and fusA cause resistance to rifampicin and fusidic acid in methicillin-resistant Staphylococcus aureus strains from a tertiary hospital in Malaysia.
Article Snippet: Results: MIC for rifampicin and fusidic acid resistance ranged from ,1 to 8 mg/ml and from ,1 to 256 mg/ml, respectively.. A double mutation (484Arg/His and 517Glu/Gln) in rpoB causes high rifampicin resistance while a mutational change (461Leu/Lys) in fusA was observed in seven strains highly resistant to fusidic acid.. Five of the seven were also resistant to rifampicin (MIC 8 mg/ml) and carried a mutated rpoB gene (484Arg/His).

Article Title: The emergence of colistin-resistant Klebsiella pneumoniae strains from swine in Malaysia.
Article Snippet: Objective: Colistin is the last line of therapy for infections caused by multidrug-resistant Gram-negative bacteria.. The objective of this study was to determine the phenotypic and genotypic characteristics of colistin-resistant Klebsiella pneumoniae (K. pneumoniae) isolated from swine samples in Malaysia.. Methods: A total of 46 swine K. pneumoniae strains isolated from 2013–2015 in Malaysia were analysed for the production of extended-spectrum β-lactamases and carbapenemase.

Article Title: Impact of combining acerola by-product with a probiotic strain on a gut microbiome model.
Article Snippet: BioNumerics 6.0 software (Applied Maths, Kortrijk, Belgium) was used to analyse the distance matrices of each DGGE based on the Pearson similarity.

Electrophoresis:

Article Title: Short communication: Diversity of species and transmission of antimicrobial resistance among Staphylococcus spp. isolated from goat milk.
Article Snippet: Clustering analysis of the pulsed-field gel electrophoresis products was performed using Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) with the unweighted pair-group method with arithmetic mean (UPGMA) algorithm and the Jaccard coefficient.

Article Title: Multilocus variable number tandem repeat analysis of Edwardsiella piscicida isolates pathogenic to fish.
Article Snippet: This study describes a novel multilocus variable number tandem repeat analysis (MLVA) based on six variable number of tandem repeat (VNTR) loci for genotyping of 37 Edwardsiella piscicida (previously Edwardsiella tarda) isolates from multiple sources.. The number of alleles identified for each of the six VNTR loci ranged from 3 to 5 with VNTR loci 1 (DI = 0.632) and 3 (DI = 0.644), displaying the highest degrees of polymorphism.. MLVA typing of the 37 E. piscicida isolates resulted in the identification of five major clusters consistent with their geographical origins, and were designated as MLVA types I, II, III, IV and V. Types III and V were resolved further into subtypes largely consistent with outbreak source.

Article Title: Prebiotic effect of fructooligosaccharide in the simulator of the human intestinal microbial ecosystem (SHIME® model).
Article Snippet: Maintaining ‘‘gut health’’ is a goal for scientists throughout the world.. Therefore, microbiota management models for testing probiotics, prebiotics, and synbiotics have been developed.. The SHIME model was used to study the effect of fructooligosaccharide (FOS) on the fermentation pattern of the colon microbiota.

Article Title: Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution
Article Snippet: Analysis was performed using the Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) to construct a Dice coefficient dendrogram based on the unweighted pair group method with arithmetics average (UPGMA) algorithm.

Article Title: Mutations in rpoB and fusA cause resistance to rifampicin and fusidic acid in methicillin-resistant Staphylococcus aureus strains from a tertiary hospital in Malaysia.
Article Snippet: Results: MIC for rifampicin and fusidic acid resistance ranged from ,1 to 8 mg/ml and from ,1 to 256 mg/ml, respectively.. A double mutation (484Arg/His and 517Glu/Gln) in rpoB causes high rifampicin resistance while a mutational change (461Leu/Lys) in fusA was observed in seven strains highly resistant to fusidic acid.. Five of the seven were also resistant to rifampicin (MIC 8 mg/ml) and carried a mutated rpoB gene (484Arg/His).

Article Title: The emergence of colistin-resistant Klebsiella pneumoniae strains from swine in Malaysia.
Article Snippet: Objective: Colistin is the last line of therapy for infections caused by multidrug-resistant Gram-negative bacteria.. The objective of this study was to determine the phenotypic and genotypic characteristics of colistin-resistant Klebsiella pneumoniae (K. pneumoniae) isolated from swine samples in Malaysia.. Methods: A total of 46 swine K. pneumoniae strains isolated from 2013–2015 in Malaysia were analysed for the production of extended-spectrum β-lactamases and carbapenemase.

Article Title: Impact of combining acerola by-product with a probiotic strain on a gut microbiome model.
Article Snippet: BioNumerics 6.0 software (Applied Maths, Kortrijk, Belgium) was used to analyse the distance matrices of each DGGE based on the Pearson similarity.

Staining:

Article Title: Short communication: Diversity of species and transmission of antimicrobial resistance among Staphylococcus spp. isolated from goat milk.
Article Snippet: Clustering analysis of the pulsed-field gel electrophoresis products was performed using Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) with the unweighted pair-group method with arithmetic mean (UPGMA) algorithm and the Jaccard coefficient.

Article Title: Multilocus variable number tandem repeat analysis of Edwardsiella piscicida isolates pathogenic to fish.
Article Snippet: This study describes a novel multilocus variable number tandem repeat analysis (MLVA) based on six variable number of tandem repeat (VNTR) loci for genotyping of 37 Edwardsiella piscicida (previously Edwardsiella tarda) isolates from multiple sources.. The number of alleles identified for each of the six VNTR loci ranged from 3 to 5 with VNTR loci 1 (DI = 0.632) and 3 (DI = 0.644), displaying the highest degrees of polymorphism.. MLVA typing of the 37 E. piscicida isolates resulted in the identification of five major clusters consistent with their geographical origins, and were designated as MLVA types I, II, III, IV and V. Types III and V were resolved further into subtypes largely consistent with outbreak source.

Article Title: Prebiotic effect of fructooligosaccharide in the simulator of the human intestinal microbial ecosystem (SHIME® model).
Article Snippet: Maintaining ‘‘gut health’’ is a goal for scientists throughout the world.. Therefore, microbiota management models for testing probiotics, prebiotics, and synbiotics have been developed.. The SHIME model was used to study the effect of fructooligosaccharide (FOS) on the fermentation pattern of the colon microbiota.

Article Title: Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution
Article Snippet: Analysis was performed using the Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) to construct a Dice coefficient dendrogram based on the unweighted pair group method with arithmetics average (UPGMA) algorithm.

Article Title: Mutations in rpoB and fusA cause resistance to rifampicin and fusidic acid in methicillin-resistant Staphylococcus aureus strains from a tertiary hospital in Malaysia.
Article Snippet: Results: MIC for rifampicin and fusidic acid resistance ranged from ,1 to 8 mg/ml and from ,1 to 256 mg/ml, respectively.. A double mutation (484Arg/His and 517Glu/Gln) in rpoB causes high rifampicin resistance while a mutational change (461Leu/Lys) in fusA was observed in seven strains highly resistant to fusidic acid.. Five of the seven were also resistant to rifampicin (MIC 8 mg/ml) and carried a mutated rpoB gene (484Arg/His).

Article Title: The emergence of colistin-resistant Klebsiella pneumoniae strains from swine in Malaysia.
Article Snippet: Objective: Colistin is the last line of therapy for infections caused by multidrug-resistant Gram-negative bacteria.. The objective of this study was to determine the phenotypic and genotypic characteristics of colistin-resistant Klebsiella pneumoniae (K. pneumoniae) isolated from swine samples in Malaysia.. Methods: A total of 46 swine K. pneumoniae strains isolated from 2013–2015 in Malaysia were analysed for the production of extended-spectrum β-lactamases and carbapenemase.

Article Title: Impact of combining acerola by-product with a probiotic strain on a gut microbiome model.
Article Snippet: BioNumerics 6.0 software (Applied Maths, Kortrijk, Belgium) was used to analyse the distance matrices of each DGGE based on the Pearson similarity.

Construct:

Article Title: Short communication: Diversity of species and transmission of antimicrobial resistance among Staphylococcus spp. isolated from goat milk.
Article Snippet: Clustering analysis of the pulsed-field gel electrophoresis products was performed using Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) with the unweighted pair-group method with arithmetic mean (UPGMA) algorithm and the Jaccard coefficient.

Article Title: Multilocus variable number tandem repeat analysis of Edwardsiella piscicida isolates pathogenic to fish.
Article Snippet: This study describes a novel multilocus variable number tandem repeat analysis (MLVA) based on six variable number of tandem repeat (VNTR) loci for genotyping of 37 Edwardsiella piscicida (previously Edwardsiella tarda) isolates from multiple sources.. The number of alleles identified for each of the six VNTR loci ranged from 3 to 5 with VNTR loci 1 (DI = 0.632) and 3 (DI = 0.644), displaying the highest degrees of polymorphism.. MLVA typing of the 37 E. piscicida isolates resulted in the identification of five major clusters consistent with their geographical origins, and were designated as MLVA types I, II, III, IV and V. Types III and V were resolved further into subtypes largely consistent with outbreak source.

Article Title: Prebiotic effect of fructooligosaccharide in the simulator of the human intestinal microbial ecosystem (SHIME® model).
Article Snippet: Maintaining ‘‘gut health’’ is a goal for scientists throughout the world.. Therefore, microbiota management models for testing probiotics, prebiotics, and synbiotics have been developed.. The SHIME model was used to study the effect of fructooligosaccharide (FOS) on the fermentation pattern of the colon microbiota.

Article Title: Molecular evidence of Burkholderia pseudomallei genotypes based on geographical distribution
Article Snippet: Analysis was performed using the Bionumerics 6.0 software (Applied Maths, Sint-Martens-Latem, Belgium) to construct a Dice coefficient dendrogram based on the unweighted pair group method with arithmetics average (UPGMA) algorithm.

Article Title: Mutations in rpoB and fusA cause resistance to rifampicin and fusidic acid in methicillin-resistant Staphylococcus aureus strains from a tertiary hospital in Malaysia.
Article Snippet: Results: MIC for rifampicin and fusidic acid resistance ranged from ,1 to 8 mg/ml and from ,1 to 256 mg/ml, respectively.. A double mutation (484Arg/His and 517Glu/Gln) in rpoB causes high rifampicin resistance while a mutational change (461Leu/Lys) in fusA was observed in seven strains highly resistant to fusidic acid.. Five of the seven were also resistant to rifampicin (MIC 8 mg/ml) and carried a mutated rpoB gene (484Arg/His).

Article Title: The emergence of colistin-resistant Klebsiella pneumoniae strains from swine in Malaysia.
Article Snippet: Objective: Colistin is the last line of therapy for infections caused by multidrug-resistant Gram-negative bacteria.. The objective of this study was to determine the phenotypic and genotypic characteristics of colistin-resistant Klebsiella pneumoniae (K. pneumoniae) isolated from swine samples in Malaysia.. Methods: A total of 46 swine K. pneumoniae strains isolated from 2013–2015 in Malaysia were analysed for the production of extended-spectrum β-lactamases and carbapenemase.

Article Title: Impact of combining acerola by-product with a probiotic strain on a gut microbiome model.
Article Snippet: BioNumerics 6.0 software (Applied Maths, Kortrijk, Belgium) was used to analyse the distance matrices of each DGGE based on the Pearson similarity.



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